Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 KRT8P19-201ENST00000551916 1455 ntBASIC13.44□□□□□ -0.26
VPS13CQ709C8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 RN7SL399P-201ENST00000471648 279 ntBASIC13.43□□□□□ -0.26
VPS13CQ709C8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC092364.2-201ENST00000596710 2692 ntBASIC13.43□□□□□ -0.26
VPS13CQ709C8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC026954.1-201ENST00000429771 1293 ntBASIC13.43□□□□□ -0.26
VPS13CQ709C8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13CQ709C8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.43□□□□□ -0.26
VPS13CQ709C8 AC013467.2-201ENST00000605472 835 ntBASIC13.43□□□□□ -0.26
VPS13CQ709C8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 RN7SL219P-201ENST00000582872 296 ntBASIC13.42□□□□□ -0.26
VPS13CQ709C8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 AC133539.2-201ENST00000604757 467 ntBASIC13.42□□□□□ -0.26
VPS13CQ709C8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 REXO1L8P-201ENST00000604378 1897 ntBASIC13.42□□□□□ -0.26
VPS13CQ709C8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 FAM21FP-201ENST00000426241 1131 ntBASIC13.42□□□□□ -0.26
VPS13CQ709C8 SERBP1P3-201ENST00000459980 809 ntBASIC13.42□□□□□ -0.26
VPS13CQ709C8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13CQ709C8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.42□□□□□ -0.26
VPS13CQ709C8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms