Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AL607033.1-201ENST00000623900 1599 ntBASIC18.2■□□□□ 0.5
CENPFP49454 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 AC006277.1-201ENST00000624348 1610 ntBASIC18.2■□□□□ 0.5
CENPFP49454 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.2■□□□□ 0.5
CENPFP49454 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CENPFP49454 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.2■□□□□ 0.5
CENPFP49454 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.2■□□□□ 0.5
CENPFP49454 PTP4A1P2-201ENST00000546033 454 ntBASIC18.2■□□□□ 0.5
CENPFP49454 MIR6069-201ENST00000620069 79 ntBASIC18.2■□□□□ 0.5
CENPFP49454 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.2■□□□□ 0.5
CENPFP49454 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.2■□□□□ 0.5
CENPFP49454 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.2■□□□□ 0.5
CENPFP49454 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.2■□□□□ 0.5
CENPFP49454 AC091046.1-201ENST00000331871 207 ntBASIC18.2■□□□□ 0.5
CENPFP49454 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.2■□□□□ 0.5
CENPFP49454 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CENPFP49454 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.2■□□□□ 0.5
CENPFP49454 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.2■□□□□ 0.5
CENPFP49454 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CENPFP49454 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.2■□□□□ 0.5
CENPFP49454 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CENPFP49454 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.19■□□□□ 0.5
CENPFP49454 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.19■□□□□ 0.5
CENPFP49454 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 PCDH8P1-201ENST00000428983 2773 ntBASIC18.19■□□□□ 0.5
CENPFP49454 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CENPFP49454 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 AL355334.1-201ENST00000417713 215 ntBASIC18.19■□□□□ 0.5
CENPFP49454 KRT90P-201ENST00000549264 1064 ntBASIC18.19■□□□□ 0.5
CENPFP49454 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.19■□□□□ 0.5
CENPFP49454 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CENPFP49454 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CENPFP49454 INTS4P2-202ENST00000614726 2019 ntBASIC18.19■□□□□ 0.5
CENPFP49454 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.19■□□□□ 0.5
CENPFP49454 SLC25A24P2-201ENST00000415059 510 ntBASIC18.19■□□□□ 0.5
CENPFP49454 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.19■□□□□ 0.5
CENPFP49454 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.19■□□□□ 0.5
CENPFP49454 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CENPFP49454 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPFP49454 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPFP49454 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CENPFP49454 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.18■□□□□ 0.5
CENPFP49454 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CENPFP49454 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CENPFP49454 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CENPFP49454 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.18■□□□□ 0.5
CENPFP49454 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.18■□□□□ 0.5
CENPFP49454 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.18■□□□□ 0.5
CENPFP49454 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPFP49454 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.18■□□□□ 0.5
CENPFP49454 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPFP49454 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.18■□□□□ 0.5
CENPFP49454 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPFP49454 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPFP49454 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CENPFP49454 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPFP49454 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CENPFP49454 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CENPFP49454 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.17■□□□□ 0.5
CENPFP49454 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 AL662890.1-201ENST00000396818 632 ntBASIC18.17■□□□□ 0.5
CENPFP49454 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.17■□□□□ 0.5
CENPFP49454 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CENPFP49454 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPFP49454 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms