Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC093724.1-201ENST00000448659 1027 ntBASIC16.58■□□□□ 0.24
HLA-DPA1P20036 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 MTDHP5-201ENST00000598980 586 ntBASIC16.58■□□□□ 0.24
HLA-DPA1P20036 AKAP8P1-201ENST00000434743 1349 ntBASIC16.58■□□□□ 0.24
HLA-DPA1P20036 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 REXO1L8P-201ENST00000604378 1897 ntBASIC16.58■□□□□ 0.24
HLA-DPA1P20036 AC063926.3-201ENST00000624734 5658 ntBASIC16.58■□□□□ 0.24
HLA-DPA1P20036 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AL355306.1-201ENST00000415580 579 ntBASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HLA-DPA1P20036 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AL592424.1-201ENST00000563624 1536 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 YBX2P1-201ENST00000394192 760 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 ACTG1P14-201ENST00000446382 1122 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 FAM86C2P-203ENST00000528684 1004 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 C20orf181-201ENST00000623918 480 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AC092902.6-201ENST00000641783 218 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 DOC2GP-204ENST00000639052 2548 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 AC073439.1-201ENST00000624121 1774 ntBASIC16.56■□□□□ 0.24
HLA-DPA1P20036 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPA1P20036 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms