Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A2P16615 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A2P16615 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A2P16615 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ATP2A2P16615 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A2P16615 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP2A2P16615 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 AP3S2-216ENST00000617003 1561 ntBASIC18.16■□□□□ 0.5
ATP2A2P16615 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A2P16615 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A2P16615 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A2P16615 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ATP2A2P16615 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A2P16615 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A2P16615 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 CROCCP2-202ENST00000412962 2773 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A2P16615 AC022211.2-201ENST00000585075 2527 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A2P16615 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A2P16615 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A2P16615 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 PKD1P5-201ENST00000532415 10291 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 AC098614.1-201ENST00000368528 745 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
ATP2A2P16615 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A2P16615 AL353779.1-201ENST00000434793 351 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 AC009477.1-201ENST00000452936 217 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A2P16615 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A2P16615 AC140912.1-201ENST00000577171 1054 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 AC091167.2-201ENST00000579581 588 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A2P16615 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A2P16615 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A2P16615 LINC00304-203ENST00000565008 1864 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 SLC22A20-204ENST00000530038 1673 ntBASIC18.15■□□□□ 0.5
ATP2A2P16615 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A2P16615 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A2P16615 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A2P16615 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A2P16615 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A2P16615 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A2P16615 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATP2A2P16615 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A2P16615 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 CICP6-201ENST00000457191 2729 ntBASIC18.14■□□□□ 0.49
ATP2A2P16615 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP2A2P16615 GIMAP3P-201ENST00000495150 836 ntBASIC18.14■□□□□ 0.49
ATP2A2P16615 AC105233.2-201ENST00000523697 349 ntBASIC18.14■□□□□ 0.49
ATP2A2P16615 AF228730.5-201ENST00000530288 346 ntBASIC18.14■□□□□ 0.49
ATP2A2P16615 AP001350.2-201ENST00000625104 1094 ntBASIC18.14■□□□□ 0.49
ATP2A2P16615 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A2P16615 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP2A2P16615 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATP2A2P16615 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP2A2P16615 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP2A2P16615 AL162727.3-201ENST00000635661 2787 ntBASIC18.13■□□□□ 0.49
ATP2A2P16615 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A2P16615 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A2P16615 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms