Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC28.14■■■□□ 2.1
TOP2AP11388 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC28.14■■■□□ 2.1
TOP2AP11388 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TOP2AP11388 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TOP2AP11388 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TOP2AP11388 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TOP2AP11388 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TOP2AP11388 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TOP2AP11388 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC28.14■■■□□ 2.09
TOP2AP11388 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC28.13■■■□□ 2.09
TOP2AP11388 C1QBPP1-201ENST00000400117 770 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 RPL13AP25-201ENST00000484130 612 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC28.13■■■□□ 2.09
TOP2AP11388 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC28.13■■■□□ 2.09
TOP2AP11388 ENPP7P5-201ENST00000541031 1031 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 IGHV3OR16-16-201ENST00000563644 343 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 ATF5-205ENST00000600336 682 ntTSL 2 BASIC28.13■■■□□ 2.09
TOP2AP11388 AC097359.3-201ENST00000603982 1210 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 GPR182-203ENST00000622922 591 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC28.13■■■□□ 2.09
TOP2AP11388 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC28.13■■■□□ 2.09
TOP2AP11388 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
TOP2AP11388 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
TOP2AP11388 AP001282.1-201ENST00000531301 1499 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC28.13■■■□□ 2.09
TOP2AP11388 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TOP2AP11388 KRT18P43-201ENST00000469825 1281 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 DUX4L45-201ENST00000566406 1057 ntBASIC28.13■■■□□ 2.09
TOP2AP11388 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC28.13■■■□□ 2.09
TOP2AP11388 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
TOP2AP11388 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TOP2AP11388 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TOP2AP11388 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
TOP2AP11388 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 TPO-206ENST00000382269 1155 ntTSL 5 BASIC28.12■■■□□ 2.09
TOP2AP11388 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC28.12■■■□□ 2.09
TOP2AP11388 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC28.12■■■□□ 2.09
TOP2AP11388 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC28.12■■■□□ 2.09
TOP2AP11388 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TOP2AP11388 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC28.12■■■□□ 2.09
TOP2AP11388 AC244093.1-201ENST00000610837 814 ntBASIC28.12■■■□□ 2.09
TOP2AP11388 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC28.12■■■□□ 2.09
TOP2AP11388 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
TOP2AP11388 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TOP2AP11388 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TOP2AP11388 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC28.12■■■□□ 2.09
TOP2AP11388 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
TOP2AP11388 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC28.11■■■□□ 2.09
TOP2AP11388 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 NF2-208ENST00000403435 2568 ntTSL 5 BASIC28.11■■■□□ 2.09
TOP2AP11388 RNF216P1-203ENST00000404404 2427 ntBASIC28.11■■■□□ 2.09
TOP2AP11388 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 OLR1-203ENST00000432556 950 ntTSL 2 BASIC28.11■■■□□ 2.09
TOP2AP11388 AC245100.3-201ENST00000441281 285 ntBASIC28.11■■■□□ 2.09
TOP2AP11388 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC28.11■■■□□ 2.09
TOP2AP11388 REXO1L8P-201ENST00000604378 1897 ntBASIC28.11■■■□□ 2.09
TOP2AP11388 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC28.11■■■□□ 2.09
TOP2AP11388 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
TOP2AP11388 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TOP2AP11388 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 MIR1247-201ENST00000408206 136 ntBASIC28.1■■■□□ 2.09
TOP2AP11388 BCYRN1-201ENST00000418539 200 ntBASIC28.1■■■□□ 2.09
TOP2AP11388 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC28.1■■■□□ 2.09
TOP2AP11388 AC022137.2-201ENST00000503482 481 ntBASIC28.1■■■□□ 2.09
TOP2AP11388 FAM86HP-204ENST00000513466 959 ntBASIC28.1■■■□□ 2.09
TOP2AP11388 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC28.1■■■□□ 2.09
TOP2AP11388 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
TOP2AP11388 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC28.1■■■□□ 2.09
TOP2AP11388 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC28.1■■■□□ 2.09
TOP2AP11388 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC28.1■■■□□ 2.09
TOP2AP11388 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC28.1■■■□□ 2.09
TOP2AP11388 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TOP2AP11388 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TOP2AP11388 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
TOP2AP11388 TEX30-203ENST00000376022 828 ntTSL 2 BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms