Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC099568.2-201ENST00000609194 695 ntBASIC16.89■□□□□ 0.29
RHOP08100 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RHOP08100 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
RHOP08100 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 AL136982.4-201ENST00000437689 1740 ntBASIC16.88■□□□□ 0.29
RHOP08100 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 AC005915.1-201ENST00000624912 2018 ntBASIC16.88■□□□□ 0.29
RHOP08100 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RHOP08100 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.88■□□□□ 0.29
RHOP08100 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.88■□□□□ 0.29
RHOP08100 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.88■□□□□ 0.29
RHOP08100 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.88■□□□□ 0.29
RHOP08100 AC123567.1-201ENST00000548294 1261 ntBASIC16.88■□□□□ 0.29
RHOP08100 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RHOP08100 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RHOP08100 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RHOP08100 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.88■□□□□ 0.29
RHOP08100 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 MIR4321-201ENST00000592276 80 ntBASIC16.88■□□□□ 0.29
RHOP08100 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RHOP08100 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RHOP08100 GGT3P-204ENST00000453783 1664 ntBASIC16.88■□□□□ 0.29
RHOP08100 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.88■□□□□ 0.29
RHOP08100 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RHOP08100 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.87■□□□□ 0.29
RHOP08100 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.87■□□□□ 0.29
RHOP08100 CYP4F24P-201ENST00000586049 1580 ntBASIC16.87■□□□□ 0.29
RHOP08100 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RHOP08100 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RHOP08100 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.87■□□□□ 0.29
RHOP08100 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
RHOP08100 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.87■□□□□ 0.29
RHOP08100 ELK1P1-201ENST00000485699 580 ntBASIC16.87■□□□□ 0.29
RHOP08100 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
RHOP08100 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
RHOP08100 AC074044.1-201ENST00000609673 707 ntBASIC16.87■□□□□ 0.29
RHOP08100 AL162274.1-201ENST00000617191 1098 ntBASIC16.87■□□□□ 0.29
RHOP08100 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.87■□□□□ 0.29
RHOP08100 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RHOP08100 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.87■□□□□ 0.29
RHOP08100 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RHOP08100 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.86■□□□□ 0.29
RHOP08100 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 AL645608.8-201ENST00000606034 2086 ntBASIC16.86■□□□□ 0.29
RHOP08100 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.86■□□□□ 0.29
RHOP08100 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.86■□□□□ 0.29
RHOP08100 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RHOP08100 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.86■□□□□ 0.29
RHOP08100 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RHOP08100 RN7SL837P-201ENST00000463010 287 ntBASIC16.86■□□□□ 0.29
RHOP08100 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms