Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF113AO15541 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF113AO15541 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF113AO15541 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RNF113AO15541 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.63■□□□□ 0.73
RNF113AO15541 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF113AO15541 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF113AO15541 AC069262.1-201ENST00000539058 672 ntBASIC19.63■□□□□ 0.73
RNF113AO15541 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 MIR4321-201ENST00000592276 80 ntBASIC19.63■□□□□ 0.73
RNF113AO15541 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF113AO15541 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RNF113AO15541 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF113AO15541 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF113AO15541 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF113AO15541 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF113AO15541 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF113AO15541 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF113AO15541 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF113AO15541 AC008677.1-201ENST00000519230 1561 ntBASIC19.62■□□□□ 0.73
RNF113AO15541 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF113AO15541 MTHFR-217ENST00000641820 1569 ntBASIC19.62■□□□□ 0.73
RNF113AO15541 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF113AO15541 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF113AO15541 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF113AO15541 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF113AO15541 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF113AO15541 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RNF113AO15541 AC025678.2-201ENST00000562061 970 ntBASIC19.62■□□□□ 0.73
RNF113AO15541 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF113AO15541 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 Z92544.3-201ENST00000624747 417 ntBASIC19.62■□□□□ 0.73
RNF113AO15541 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF113AO15541 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF113AO15541 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF113AO15541 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF113AO15541 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF113AO15541 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF113AO15541 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF113AO15541 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF113AO15541 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF113AO15541 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF113AO15541 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 AC124067.4-201ENST00000519691 2379 ntBASIC19.61■□□□□ 0.73
RNF113AO15541 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF113AO15541 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF113AO15541 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF113AO15541 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF113AO15541 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF113AO15541 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF113AO15541 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF113AO15541 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms