Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 UPF3AP2-201ENST00000457924 1132 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 AC092183.1-201ENST00000469884 875 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 AP000344.2-201ENST00000512987 629 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 AP002472.1-201ENST00000577490 586 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 MIR3909-201ENST00000579518 119 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 AC012569.1-201ENST00000591191 1524 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 AL121761.2-201ENST00000598007 1648 ntBASIC14.79□□□□□ -0.04
USB1Q9BQ65 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
USB1Q9BQ65 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.79□□□□□ -0.04
USB1Q9BQ65 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 TUBB8P12-201ENST00000308911 1335 ntBASIC14.78□□□□□ -0.04
USB1Q9BQ65 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 TUBB7P-202ENST00000428444 1305 ntBASIC14.78□□□□□ -0.04
USB1Q9BQ65 TUBB8P7-204ENST00000567960 1332 ntBASIC14.78□□□□□ -0.04
USB1Q9BQ65 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 AC091812.2-201ENST00000619081 385 ntBASIC14.78□□□□□ -0.04
USB1Q9BQ65 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USB1Q9BQ65 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
USB1Q9BQ65 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
USB1Q9BQ65 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
USB1Q9BQ65 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USB1Q9BQ65 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms