Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc9Q8VC31 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Mir8098-201ENSMUST00000184011 137 ntBASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 AC166359.1-201ENSMUST00000220243 1871 ntBASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 AC160410.1-201ENSMUST00000219298 1972 ntBASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc9Q8VC31 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Gm10110-202ENSMUST00000228705 3220 ntBASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc9Q8VC31 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm7222-201ENSMUST00000117512 906 ntBASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm7862-201ENSMUST00000121461 292 ntBASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm28659-201ENSMUST00000188013 759 ntBASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm1995-201ENSMUST00000220838 2602 ntBASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.11■□□□□ 0.17
Ccdc9Q8VC31 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms