Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.86■■□□□ 1.09
USP6P35125 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.86■■□□□ 1.09
USP6P35125 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.86■■□□□ 1.09
USP6P35125 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.86■■□□□ 1.09
USP6P35125 BRI3BPP1-201ENST00000594224 787 ntBASIC21.86■■□□□ 1.09
USP6P35125 MIR6775-201ENST00000617557 69 ntBASIC21.86■■□□□ 1.09
USP6P35125 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.86■■□□□ 1.09
USP6P35125 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.86■■□□□ 1.09
USP6P35125 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
USP6P35125 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
USP6P35125 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.86■■□□□ 1.09
USP6P35125 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
USP6P35125 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP6P35125 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.85■■□□□ 1.09
USP6P35125 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
USP6P35125 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.85■■□□□ 1.09
USP6P35125 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.85■■□□□ 1.09
USP6P35125 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.85■■□□□ 1.09
USP6P35125 AC104596.2-201ENST00000512793 793 ntBASIC21.85■■□□□ 1.09
USP6P35125 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.85■■□□□ 1.09
USP6P35125 AP005482.1-201ENST00000563722 1273 ntBASIC21.85■■□□□ 1.09
USP6P35125 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
USP6P35125 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
USP6P35125 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP6P35125 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.84■■□□□ 1.09
USP6P35125 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.84■■□□□ 1.09
USP6P35125 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.84■■□□□ 1.09
USP6P35125 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
USP6P35125 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.84■■□□□ 1.09
USP6P35125 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.84■■□□□ 1.09
USP6P35125 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
USP6P35125 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.84■■□□□ 1.09
USP6P35125 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
USP6P35125 BNIP3P1-202ENST00000550043 1585 ntBASIC21.84■■□□□ 1.09
USP6P35125 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.84■■□□□ 1.09
USP6P35125 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USP6P35125 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.84■■□□□ 1.09
USP6P35125 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
USP6P35125 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.83■■□□□ 1.09
USP6P35125 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP6P35125 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP6P35125 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.83■■□□□ 1.09
USP6P35125 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP6P35125 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP6P35125 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.83■■□□□ 1.09
USP6P35125 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
USP6P35125 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.83■■□□□ 1.09
USP6P35125 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.83■■□□□ 1.09
USP6P35125 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.83■■□□□ 1.09
USP6P35125 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.83■■□□□ 1.09
USP6P35125 MIR6799-201ENST00000620297 69 ntBASIC21.83■■□□□ 1.09
USP6P35125 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
USP6P35125 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP6P35125 AC018665.1-201ENST00000622927 1362 ntBASIC21.83■■□□□ 1.08
USP6P35125 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
USP6P35125 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.83■■□□□ 1.08
USP6P35125 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP6P35125 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
USP6P35125 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.83■■□□□ 1.08
USP6P35125 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP6P35125 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms