Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNGA1P29973 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.66■□□□□ 0.58
CNGA1P29973 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CNGA1P29973 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 FAM220BP-201ENST00000377689 816 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.66■□□□□ 0.58
CNGA1P29973 AC022494.1-201ENST00000466044 728 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 AC104794.3-201ENST00000566840 1248 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 AC132938.2-201ENST00000579188 680 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CNGA1P29973 MIR6799-201ENST00000620297 69 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.66■□□□□ 0.58
CNGA1P29973 AL591163.1-201ENST00000641757 987 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 AL139384.1-201ENST00000612143 3047 ntBASIC18.66■□□□□ 0.58
CNGA1P29973 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CNGA1P29973 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CNGA1P29973 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.66■□□□□ 0.58
CNGA1P29973 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CNGA1P29973 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNGA1P29973 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNGA1P29973 AC073439.1-201ENST00000624121 1774 ntBASIC18.65■□□□□ 0.58
CNGA1P29973 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CNGA1P29973 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNGA1P29973 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.65■□□□□ 0.58
CNGA1P29973 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.65■□□□□ 0.58
CNGA1P29973 AC087499.6-201ENST00000411576 835 ntBASIC18.65■□□□□ 0.58
CNGA1P29973 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.65■□□□□ 0.58
CNGA1P29973 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CNGA1P29973 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.65■□□□□ 0.58
CNGA1P29973 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.65■□□□□ 0.58
CNGA1P29973 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.65■□□□□ 0.58
CNGA1P29973 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.65■□□□□ 0.58
CNGA1P29973 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.65■□□□□ 0.58
CNGA1P29973 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNGA1P29973 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CNGA1P29973 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
CNGA1P29973 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNGA1P29973 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.64■□□□□ 0.58
CNGA1P29973 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CNGA1P29973 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNGA1P29973 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CNGA1P29973 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.64■□□□□ 0.58
CNGA1P29973 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CNGA1P29973 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.64■□□□□ 0.57
CNGA1P29973 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.64■□□□□ 0.57
CNGA1P29973 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 SPDYE19P-201ENST00000338590 713 ntBASIC18.64■□□□□ 0.57
CNGA1P29973 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 AL512384.1-201ENST00000406683 331 ntBASIC18.64■□□□□ 0.57
CNGA1P29973 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.64■□□□□ 0.57
CNGA1P29973 DFFBP1-201ENST00000433250 979 ntBASIC18.64■□□□□ 0.57
CNGA1P29973 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.64■□□□□ 0.57
CNGA1P29973 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms