Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHRNA1P02708 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA1P02708 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA1P02708 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.74■□□□□ 0.43
CHRNA1P02708 MIR4321-201ENST00000592276 80 ntBASIC17.74■□□□□ 0.43
CHRNA1P02708 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.74■□□□□ 0.43
CHRNA1P02708 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHRNA1P02708 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHRNA1P02708 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
CHRNA1P02708 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CHRNA1P02708 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CHRNA1P02708 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CHRNA1P02708 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.73■□□□□ 0.43
CHRNA1P02708 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.73■□□□□ 0.43
CHRNA1P02708 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.73■□□□□ 0.43
CHRNA1P02708 HILS1-202ENST00000545329 423 ntBASIC17.73■□□□□ 0.43
CHRNA1P02708 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHRNA1P02708 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.73■□□□□ 0.43
CHRNA1P02708 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHRNA1P02708 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 CYP4F24P-201ENST00000586049 1580 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA1P02708 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHRNA1P02708 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 AC098850.1-201ENST00000419919 790 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA1P02708 MYCLP2-201ENST00000449268 967 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 GPR53P-205ENST00000457298 1084 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.72■□□□□ 0.43
CHRNA1P02708 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA1P02708 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CHRNA1P02708 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA1P02708 CTBP2P3-201ENST00000585629 1255 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA1P02708 AL365330.1-201ENST00000607459 531 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 AC099568.2-201ENST00000609194 695 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 MIR6752-201ENST00000618442 71 ntBASIC17.72■□□□□ 0.43
CHRNA1P02708 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA1P02708 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA1P02708 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA1P02708 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms