Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.55■□□□□ 0.72
MBD4O95243 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD4O95243 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD4O95243 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MBD4O95243 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.55■□□□□ 0.72
MBD4O95243 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
MBD4O95243 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 U82695.1-201ENST00000635752 1889 ntBASIC19.54■□□□□ 0.72
MBD4O95243 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
MBD4O95243 AL353705.2-201ENST00000428243 662 ntBASIC19.54■□□□□ 0.72
MBD4O95243 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.54■□□□□ 0.72
MBD4O95243 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 OR6D1P-203ENST00000641209 4860 ntBASIC19.54■□□□□ 0.72
MBD4O95243 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD4O95243 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MBD4O95243 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD4O95243 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.54■□□□□ 0.72
MBD4O95243 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MBD4O95243 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD4O95243 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD4O95243 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
MBD4O95243 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MBD4O95243 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
MBD4O95243 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.53■□□□□ 0.72
MBD4O95243 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD4O95243 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.53■□□□□ 0.72
MBD4O95243 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD4O95243 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 REXO1L8P-201ENST00000604378 1897 ntBASIC19.53■□□□□ 0.72
MBD4O95243 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD4O95243 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MBD4O95243 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD4O95243 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD4O95243 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
MBD4O95243 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
MBD4O95243 AC055876.3-201ENST00000431496 288 ntBASIC19.52■□□□□ 0.72
MBD4O95243 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
MBD4O95243 AC069120.2-201ENST00000524091 540 ntBASIC19.52■□□□□ 0.72
MBD4O95243 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD4O95243 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD4O95243 AC105021.1-202ENST00000570572 669 ntBASIC19.52■□□□□ 0.72
MBD4O95243 AC024267.1-201ENST00000582320 895 ntBASIC19.52■□□□□ 0.72
MBD4O95243 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD4O95243 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD4O95243 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
MBD4O95243 AC138649.4-201ENST00000612222 287 ntBASIC19.52■□□□□ 0.72
MBD4O95243 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD4O95243 SPDYE12P-201ENST00000618416 771 ntBASIC19.52■□□□□ 0.72
MBD4O95243 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MBD4O95243 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD4O95243 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD4O95243 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms