Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 WASH6P-202ENST00000359512 1437 ntBASIC14.34□□□□□ -0.11
SYNGR3O43761 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.34□□□□□ -0.11
SYNGR3O43761 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 AC093724.1-201ENST00000448659 1027 ntBASIC14.34□□□□□ -0.11
SYNGR3O43761 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.34□□□□□ -0.11
SYNGR3O43761 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 FAM86C2P-203ENST00000528684 1004 ntBASIC14.34□□□□□ -0.11
SYNGR3O43761 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.34□□□□□ -0.11
SYNGR3O43761 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.34□□□□□ -0.11
SYNGR3O43761 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 AL592424.1-201ENST00000563624 1536 ntBASIC14.34□□□□□ -0.11
SYNGR3O43761 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SYNGR3O43761 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
SYNGR3O43761 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.34□□□□□ -0.11
SYNGR3O43761 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 CROCCP1-201ENST00000426910 5675 ntBASIC14.34□□□□□ -0.11
SYNGR3O43761 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SYNGR3O43761 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYNGR3O43761 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.34□□□□□ -0.11
SYNGR3O43761 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
SYNGR3O43761 U82695.1-201ENST00000635752 1889 ntBASIC14.33□□□□□ -0.11
SYNGR3O43761 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SYNGR3O43761 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
SYNGR3O43761 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.33□□□□□ -0.11
SYNGR3O43761 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.33□□□□□ -0.11
SYNGR3O43761 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 AC092183.1-201ENST00000469884 875 ntBASIC14.33□□□□□ -0.12
SYNGR3O43761 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.33□□□□□ -0.12
SYNGR3O43761 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 AC099522.2-201ENST00000607001 744 ntBASIC14.33□□□□□ -0.12
SYNGR3O43761 AL596442.2-201ENST00000610240 980 ntBASIC14.33□□□□□ -0.12
SYNGR3O43761 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.33□□□□□ -0.12
SYNGR3O43761 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SYNGR3O43761 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYNGR3O43761 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.32□□□□□ -0.12
SYNGR3O43761 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms