Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
FOXN1O15353 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 FLJ38576-201ENST00000623820 2459 ntBASIC19.58■□□□□ 0.72
FOXN1O15353 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FOXN1O15353 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.58■□□□□ 0.72
FOXN1O15353 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 AC093525.9-201ENST00000624961 1746 ntBASIC19.57■□□□□ 0.72
FOXN1O15353 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXN1O15353 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXN1O15353 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXN1O15353 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXN1O15353 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
FOXN1O15353 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXN1O15353 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXN1O15353 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 TUBB1P2-201ENST00000422712 1306 ntBASIC19.56■□□□□ 0.72
FOXN1O15353 TUBB1P1-201ENST00000503144 1300 ntBASIC19.56■□□□□ 0.72
FOXN1O15353 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 AC007389.4-201ENST00000454674 793 ntBASIC19.56■□□□□ 0.72
FOXN1O15353 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.56■□□□□ 0.72
FOXN1O15353 DOC2GP-202ENST00000514950 1163 ntBASIC19.56■□□□□ 0.72
FOXN1O15353 AC109635.5-201ENST00000533593 962 ntBASIC19.56■□□□□ 0.72
FOXN1O15353 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXN1O15353 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.56■□□□□ 0.72
FOXN1O15353 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FOXN1O15353 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXN1O15353 LINC02012-201ENST00000608206 1725 ntBASIC19.56■□□□□ 0.72
FOXN1O15353 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXN1O15353 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXN1O15353 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN1O15353 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN1O15353 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
FOXN1O15353 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXN1O15353 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FOXN1O15353 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXN1O15353 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXN1O15353 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXN1O15353 AC106872.11-201ENST00000605838 421 ntBASIC19.55■□□□□ 0.72
FOXN1O15353 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.55■□□□□ 0.72
FOXN1O15353 AC090340.1-201ENST00000620778 4980 ntBASIC19.55■□□□□ 0.72
FOXN1O15353 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
FOXN1O15353 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN1O15353 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXN1O15353 AC105020.1-201ENST00000435356 2205 ntBASIC19.55■□□□□ 0.72
FOXN1O15353 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN1O15353 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXN1O15353 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms