Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim13Q9CYB0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Trim13Q9CYB0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Trim13Q9CYB0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim13Q9CYB0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim13Q9CYB0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim13Q9CYB0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim13Q9CYB0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim13Q9CYB0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim13Q9CYB0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim13Q9CYB0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim13Q9CYB0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim13Q9CYB0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim13Q9CYB0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim13Q9CYB0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim13Q9CYB0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim13Q9CYB0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim13Q9CYB0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Trim13Q9CYB0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim13Q9CYB0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim13Q9CYB0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim13Q9CYB0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim13Q9CYB0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim13Q9CYB0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.68■□□□□ 0.74
Trim13Q9CYB0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim13Q9CYB0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim13Q9CYB0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim13Q9CYB0 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.68■□□□□ 0.74
Trim13Q9CYB0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim13Q9CYB0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim13Q9CYB0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim13Q9CYB0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim13Q9CYB0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim13Q9CYB0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim13Q9CYB0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim13Q9CYB0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.67■□□□□ 0.74
Trim13Q9CYB0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim13Q9CYB0 Mir3960-201ENSMUST00000198213 73 ntBASIC19.66■□□□□ 0.74
Trim13Q9CYB0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim13Q9CYB0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim13Q9CYB0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim13Q9CYB0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Terc-201ENSMUST00000082862 423 ntBASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim13Q9CYB0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim13Q9CYB0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim13Q9CYB0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim13Q9CYB0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim13Q9CYB0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim13Q9CYB0 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.61■□□□□ 0.73
Trim13Q9CYB0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Trim13Q9CYB0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim13Q9CYB0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim13Q9CYB0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim13Q9CYB0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 1014.2 ms