Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh18Q8VHR0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh18Q8VHR0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh18Q8VHR0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh18Q8VHR0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh18Q8VHR0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdh18Q8VHR0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh18Q8VHR0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh18Q8VHR0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh18Q8VHR0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh18Q8VHR0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh18Q8VHR0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Terc-201ENSMUST00000082862 423 ntBASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh18Q8VHR0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh18Q8VHR0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh18Q8VHR0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh18Q8VHR0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh18Q8VHR0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh18Q8VHR0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh18Q8VHR0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh18Q8VHR0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh18Q8VHR0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh18Q8VHR0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdh18Q8VHR0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh18Q8VHR0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh18Q8VHR0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh18Q8VHR0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdh18Q8VHR0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh18Q8VHR0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh18Q8VHR0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh18Q8VHR0 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.4■□□□□ 0.86
Pcdh18Q8VHR0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh18Q8VHR0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh18Q8VHR0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh18Q8VHR0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh18Q8VHR0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh18Q8VHR0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh18Q8VHR0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh18Q8VHR0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh18Q8VHR0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh18Q8VHR0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh18Q8VHR0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms