Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Limd2Q8BGB5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Limd2Q8BGB5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Limd2Q8BGB5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Limd2Q8BGB5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Limd2Q8BGB5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Limd2Q8BGB5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Limd2Q8BGB5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Limd2Q8BGB5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Gm12504-201ENSMUST00000120860 2231 ntBASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Limd2Q8BGB5 Gm9954-202ENSMUST00000198686 4725 ntBASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Limd2Q8BGB5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Gm26115-201ENSMUST00000175605 87 ntBASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Limd2Q8BGB5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Limd2Q8BGB5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms