Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn2bP55271 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.6■□□□□ 0.89
Cdkn2bP55271 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn2bP55271 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn2bP55271 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn2bP55271 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.59■□□□□ 0.89
Cdkn2bP55271 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn2bP55271 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn2bP55271 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.59■□□□□ 0.89
Cdkn2bP55271 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdkn2bP55271 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cdkn2bP55271 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkn2bP55271 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdkn2bP55271 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdkn2bP55271 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdkn2bP55271 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkn2bP55271 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkn2bP55271 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.58■□□□□ 0.88
Cdkn2bP55271 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn2bP55271 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn2bP55271 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdkn2bP55271 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn2bP55271 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdkn2bP55271 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn2bP55271 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdkn2bP55271 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.57■□□□□ 0.88
Cdkn2bP55271 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn2bP55271 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
Cdkn2bP55271 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn2bP55271 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Cdkn2bP55271 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn2bP55271 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn2bP55271 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn2bP55271 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdkn2bP55271 Gm6311-201ENSMUST00000073790 878 ntBASIC20.54■□□□□ 0.88
Cdkn2bP55271 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn2bP55271 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Cdkn2bP55271 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn2bP55271 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn2bP55271 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Cdkn2bP55271 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdkn2bP55271 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn2bP55271 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn2bP55271 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.51■□□□□ 0.87
Cdkn2bP55271 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.51■□□□□ 0.87
Cdkn2bP55271 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdkn2bP55271 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn2bP55271 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn2bP55271 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn2bP55271 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkn2bP55271 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkn2bP55271 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkn2bP55271 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkn2bP55271 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cdkn2bP55271 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkn2bP55271 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Cdkn2bP55271 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn2bP55271 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn2bP55271 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn2bP55271 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn2bP55271 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn2bP55271 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkn2bP55271 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms