Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
HMGB1P09429 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
HMGB1P09429 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
HMGB1P09429 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HMGB1P09429 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.07■■■□□ 2.08
HMGB1P09429 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HMGB1P09429 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HMGB1P09429 U85056.1-201ENST00000616429 682 ntBASIC28.07■■■□□ 2.08
HMGB1P09429 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HMGB1P09429 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
HMGB1P09429 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGB1P09429 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGB1P09429 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
HMGB1P09429 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.06■■■□□ 2.08
HMGB1P09429 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGB1P09429 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGB1P09429 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.06■■■□□ 2.08
HMGB1P09429 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HMGB1P09429 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HMGB1P09429 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.05■■■□□ 2.08
HMGB1P09429 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HMGB1P09429 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HMGB1P09429 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.05■■■□□ 2.08
HMGB1P09429 ABHD17AP5-201ENST00000580133 923 ntBASIC28.05■■■□□ 2.08
HMGB1P09429 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HMGB1P09429 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
HMGB1P09429 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGB1P09429 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
HMGB1P09429 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
HMGB1P09429 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGB1P09429 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGB1P09429 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HMGB1P09429 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HMGB1P09429 AC138932.3-201ENST00000567634 1902 ntBASIC28.03■■■□□ 2.08
HMGB1P09429 SPCS2P3-201ENST00000500401 656 ntBASIC28.03■■■□□ 2.08
HMGB1P09429 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.03■■■□□ 2.08
HMGB1P09429 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
HMGB1P09429 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HMGB1P09429 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HMGB1P09429 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.02■■■□□ 2.08
HMGB1P09429 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.02■■■□□ 2.08
HMGB1P09429 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
HMGB1P09429 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HMGB1P09429 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
HMGB1P09429 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
HMGB1P09429 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
HMGB1P09429 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28■■■□□ 2.07
HMGB1P09429 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28■■■□□ 2.07
HMGB1P09429 MIR6765-201ENST00000614092 87 ntBASIC28■■■□□ 2.07
HMGB1P09429 RPS2P7-201ENST00000447334 885 ntBASIC27.99■■■□□ 2.07
HMGB1P09429 AP003733.4-201ENST00000623785 1697 ntBASIC27.99■■■□□ 2.07
HMGB1P09429 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.99■■■□□ 2.07
HMGB1P09429 KRT18P60-201ENST00000312876 1297 ntBASIC27.98■■■□□ 2.07
HMGB1P09429 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.98■■■□□ 2.07
HMGB1P09429 DUX4L9-201ENST00000449051 1259 ntBASIC27.98■■■□□ 2.07
HMGB1P09429 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
HMGB1P09429 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
HMGB1P09429 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
HMGB1P09429 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
HMGB1P09429 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
HMGB1P09429 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HMGB1P09429 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HMGB1P09429 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.97■■■□□ 2.07
HMGB1P09429 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.96■■■□□ 2.07
HMGB1P09429 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC27.96■■■□□ 2.07
HMGB1P09429 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
HMGB1P09429 AC129492.7-201ENST00000622992 756 ntBASIC27.96■■■□□ 2.07
HMGB1P09429 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.07
HMGB1P09429 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
HMGB1P09429 NTF6A-201ENST00000591175 560 ntBASIC27.95■■■□□ 2.06
HMGB1P09429 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
HMGB1P09429 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
HMGB1P09429 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.94■■■□□ 2.06
HMGB1P09429 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
HMGB1P09429 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
HMGB1P09429 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
HMGB1P09429 AC087393.1-201ENST00000582896 145 ntBASIC27.94■■■□□ 2.06
HMGB1P09429 FOXO3B-201ENST00000395675 1928 ntBASIC27.94■■■□□ 2.06
HMGB1P09429 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
HMGB1P09429 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.93■■■□□ 2.06
HMGB1P09429 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
HMGB1P09429 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
HMGB1P09429 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.93■■■□□ 2.06
HMGB1P09429 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.93■■■□□ 2.06
HMGB1P09429 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
HMGB1P09429 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
HMGB1P09429 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
HMGB1P09429 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.92■■■□□ 2.06
HMGB1P09429 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.92■■■□□ 2.06
HMGB1P09429 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
HMGB1P09429 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
HMGB1P09429 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
HMGB1P09429 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
HMGB1P09429 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms