Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfi1bO70237 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.8■□□□□ 0.44
Gfi1bO70237 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfi1bO70237 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gfi1bO70237 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfi1bO70237 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfi1bO70237 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gfi1bO70237 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfi1bO70237 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gfi1bO70237 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Gfi1bO70237 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfi1bO70237 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfi1bO70237 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.78■□□□□ 0.44
Gfi1bO70237 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfi1bO70237 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gfi1bO70237 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Gfi1bO70237 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gfi1bO70237 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gfi1bO70237 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gfi1bO70237 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gfi1bO70237 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gfi1bO70237 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gfi1bO70237 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.76■□□□□ 0.43
Gfi1bO70237 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.76■□□□□ 0.43
Gfi1bO70237 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gfi1bO70237 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gfi1bO70237 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gfi1bO70237 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.75■□□□□ 0.43
Gfi1bO70237 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Gfi1bO70237 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gfi1bO70237 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.75■□□□□ 0.43
Gfi1bO70237 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfi1bO70237 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfi1bO70237 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Gfi1bO70237 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfi1bO70237 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfi1bO70237 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gfi1bO70237 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfi1bO70237 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gfi1bO70237 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
Gfi1bO70237 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gfi1bO70237 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gfi1bO70237 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Gfi1bO70237 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gfi1bO70237 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.73■□□□□ 0.43
Gfi1bO70237 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gfi1bO70237 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfi1bO70237 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gfi1bO70237 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gfi1bO70237 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfi1bO70237 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfi1bO70237 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfi1bO70237 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfi1bO70237 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfi1bO70237 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gfi1bO70237 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gfi1bO70237 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gfi1bO70237 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gfi1bO70237 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.7■□□□□ 0.42
Gfi1bO70237 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gfi1bO70237 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfi1bO70237 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gfi1bO70237 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gfi1bO70237 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gfi1bO70237 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gfi1bO70237 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gfi1bO70237 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gfi1bO70237 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.69■□□□□ 0.42
Gfi1bO70237 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Gfi1bO70237 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gfi1bO70237 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfi1bO70237 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfi1bO70237 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gfi1bO70237 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.68■□□□□ 0.42
Gfi1bO70237 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gfi1bO70237 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfi1bO70237 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gfi1bO70237 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfi1bO70237 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gfi1bO70237 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gfi1bO70237 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfi1bO70237 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gfi1bO70237 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.67■□□□□ 0.42
Gfi1bO70237 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gfi1bO70237 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.67■□□□□ 0.42
Gfi1bO70237 Gm4799-201ENSMUST00000095396 657 ntBASIC17.67■□□□□ 0.42
Gfi1bO70237 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gfi1bO70237 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.66■□□□□ 0.42
Gfi1bO70237 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfi1bO70237 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfi1bO70237 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Gfi1bO70237 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gfi1bO70237 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gfi1bO70237 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms