Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00862A6NCI5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 FOXO3B-201ENST00000395675 1928 ntBASIC19.48■□□□□ 0.71
LINC00862A6NCI5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC00862A6NCI5 AC142472.1-201ENST00000612013 1741 ntBASIC19.48■□□□□ 0.71
LINC00862A6NCI5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.47■□□□□ 0.71
LINC00862A6NCI5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00862A6NCI5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC00862A6NCI5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00862A6NCI5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00862A6NCI5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC00862A6NCI5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00862A6NCI5 AL137060.1-201ENST00000618151 2648 ntBASIC19.46■□□□□ 0.71
LINC00862A6NCI5 AC127502.1-201ENST00000399971 1502 ntBASIC19.46■□□□□ 0.71
LINC00862A6NCI5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 AC092667.1-201ENST00000434301 2586 ntBASIC19.45■□□□□ 0.7
LINC00862A6NCI5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00862A6NCI5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC00862A6NCI5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC00862A6NCI5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00862A6NCI5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00862A6NCI5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00862A6NCI5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00862A6NCI5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00862A6NCI5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00862A6NCI5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00862A6NCI5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00862A6NCI5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00862A6NCI5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms