Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4n-4A0A075B615 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4n-4A0A075B615 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4n-4A0A075B615 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4n-4A0A075B615 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav4n-4A0A075B615 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.86□□□□□ -0.03
Trav4n-4A0A075B615 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav4n-4A0A075B615 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4n-4A0A075B615 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav4n-4A0A075B615 Gm16148-201ENSMUST00000119653 893 ntBASIC14.85□□□□□ -0.03
Trav4n-4A0A075B615 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4n-4A0A075B615 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav4n-4A0A075B615 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav4n-4A0A075B615 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 Iqck-206ENSMUST00000208658 2891 ntBASIC14.84□□□□□ -0.03
Trav4n-4A0A075B615 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav4n-4A0A075B615 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Trav4n-4A0A075B615 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav4n-4A0A075B615 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4n-4A0A075B615 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4n-4A0A075B615 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4n-4A0A075B615 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4n-4A0A075B615 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trav4n-4A0A075B615 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav4n-4A0A075B615 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4n-4A0A075B615 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4n-4A0A075B615 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms