Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS9D1Q9Y2B5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS9D1Q9Y2B5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS9D1Q9Y2B5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS9D1Q9Y2B5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AC092364.2-201ENST00000596710 2692 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AL691447.1-201ENST00000419456 387 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AC140658.5-201ENST00000438532 169 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AL591424.1-201ENST00000442569 1213 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AL009183.1-201ENST00000603760 355 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 BX640515.1-201ENST00000617215 977 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 U82695.1-201ENST00000635752 1889 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 IL9RP2-201ENST00000423948 1312 ntBASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS9D1Q9Y2B5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 AL590627.1-203ENST00000421194 1026 ntBASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 FDX1P1-201ENST00000449115 551 ntBASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 KRT18P34-201ENST00000488218 1270 ntBASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 AL391005.1-201ENST00000623953 2435 ntBASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 BCAR1-209ENST00000546196 1340 ntBASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VPS9D1Q9Y2B5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
VPS9D1Q9Y2B5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
VPS9D1Q9Y2B5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.39■□□□□ 0.22
VPS9D1Q9Y2B5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
VPS9D1Q9Y2B5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.39■□□□□ 0.22
VPS9D1Q9Y2B5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms