Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AC007967.4-201ENST00000614700 386 ntBASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AC093512.1-201ENST00000617969 520 ntBASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 AC003101.2-201ENST00000612557 442 ntBASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 AC005052.1-201ENST00000625181 2492 ntBASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCD1Q96GM5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 AC107890.1-201ENST00000422478 521 ntBASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 AL355385.1-201ENST00000606123 409 ntBASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 AL365330.1-201ENST00000607459 531 ntBASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCD1Q96GM5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms