Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.32□□□□□ -0.28
LINC00311Q8N616 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 DNAJB3-201ENST00000446806 729 ntBASIC13.31□□□□□ -0.28
LINC00311Q8N616 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 AC098859.1-201ENST00000502915 1238 ntBASIC13.31□□□□□ -0.28
LINC00311Q8N616 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 MIR4321-201ENST00000592276 80 ntBASIC13.31□□□□□ -0.28
LINC00311Q8N616 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00311Q8N616 AC022188.1-201ENST00000620960 1664 ntBASIC13.31□□□□□ -0.28
LINC00311Q8N616 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
LINC00311Q8N616 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00311Q8N616 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00311Q8N616 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms