Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.54■□□□□ 0.4
CEP290O15078 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEP290O15078 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
CEP290O15078 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.53■□□□□ 0.4
CEP290O15078 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.53■□□□□ 0.4
CEP290O15078 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.53■□□□□ 0.4
CEP290O15078 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.53■□□□□ 0.4
CEP290O15078 AL136982.4-201ENST00000437689 1740 ntBASIC17.53■□□□□ 0.4
CEP290O15078 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.53■□□□□ 0.4
CEP290O15078 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CEP290O15078 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CEP290O15078 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.53■□□□□ 0.4
CEP290O15078 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEP290O15078 MIR769-201ENST00000390225 118 ntBASIC17.53■□□□□ 0.4
CEP290O15078 TOMM22P5-201ENST00000416399 439 ntBASIC17.53■□□□□ 0.4
CEP290O15078 AL139010.1-201ENST00000454878 894 ntBASIC17.53■□□□□ 0.4
CEP290O15078 RPSAP36-202ENST00000494591 1261 ntBASIC17.53■□□□□ 0.4
CEP290O15078 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.53■□□□□ 0.4
CEP290O15078 AC044849.1-201ENST00000519737 1188 ntBASIC17.53■□□□□ 0.4
CEP290O15078 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CEP290O15078 CLUHP6-201ENST00000580789 941 ntBASIC17.53■□□□□ 0.4
CEP290O15078 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.53■□□□□ 0.4
CEP290O15078 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.53■□□□□ 0.4
CEP290O15078 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.53■□□□□ 0.4
CEP290O15078 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.52■□□□□ 0.4
CEP290O15078 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CEP290O15078 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CEP290O15078 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CEP290O15078 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CEP290O15078 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.52■□□□□ 0.4
CEP290O15078 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.52■□□□□ 0.4
CEP290O15078 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CEP290O15078 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CEP290O15078 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.52■□□□□ 0.4
CEP290O15078 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
CEP290O15078 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CEP290O15078 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CEP290O15078 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CEP290O15078 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CEP290O15078 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CEP290O15078 AC015818.8-201ENST00000587907 1519 ntBASIC17.52■□□□□ 0.39
CEP290O15078 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.39
CEP290O15078 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.52■□□□□ 0.39
CEP290O15078 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.52■□□□□ 0.39
CEP290O15078 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CEP290O15078 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.52■□□□□ 0.39
CEP290O15078 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CEP290O15078 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.52■□□□□ 0.39
CEP290O15078 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CEP290O15078 SERPINA13P-202ENST00000478994 924 ntBASIC17.52■□□□□ 0.39
CEP290O15078 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.52■□□□□ 0.39
CEP290O15078 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CEP290O15078 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CEP290O15078 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
CEP290O15078 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.51■□□□□ 0.39
CEP290O15078 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CEP290O15078 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.51■□□□□ 0.39
CEP290O15078 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.51■□□□□ 0.39
CEP290O15078 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.51■□□□□ 0.39
CEP290O15078 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.51■□□□□ 0.39
CEP290O15078 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.51■□□□□ 0.39
CEP290O15078 AP000346.4-201ENST00000614827 381 ntBASIC17.51■□□□□ 0.39
CEP290O15078 AC244452.3-201ENST00000636814 210 ntBASIC17.51■□□□□ 0.39
CEP290O15078 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.51■□□□□ 0.39
CEP290O15078 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CEP290O15078 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CEP290O15078 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms