Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AL441883.1-201ENST00000566170 1045 ntBASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CYP2A7P1-201ENST00000595391 815 ntBASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 REXO1L3P-201ENST00000622202 1288 ntBASIC11.62□□□□□ -0.55
LINC01546A6NGU7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 U82695.1-201ENST00000635752 1889 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AL137784.3-201ENST00000623858 2288 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 FER1L4-210ENST00000615531 5998 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 HAUS4P1-201ENST00000406739 1145 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AC246785.2-201ENST00000432512 513 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AC011840.4-201ENST00000578471 627 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AL353135.1-201ENST00000606729 504 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AC148477.4-201ENST00000613430 1793 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 AJ011931.1-201ENST00000618749 2492 ntBASIC11.61□□□□□ -0.55
LINC01546A6NGU7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01546A6NGU7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms