Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3aQ9JKX8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Gm6447-201ENSMUST00000118905 835 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Gm18473-201ENSMUST00000220543 868 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Itm2b-204ENSMUST00000228637 783 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3aQ9JKX8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Mir7221-201ENSMUST00000184009 72 ntBASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3aQ9JKX8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3aQ9JKX8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms