Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 AC078925.2-201ENST00000624013 1973 ntBASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC85AQ96PX6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 AP002490.2-201ENST00000524791 560 ntBASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 AC009407.1-201ENST00000568958 598 ntBASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 AC008738.7-201ENST00000609744 511 ntBASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC85AQ96PX6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 AL589702.1-201ENST00000641229 1509 ntBASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 AC092171.3-201ENST00000610122 2651 ntBASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 AL844908.2-201ENST00000609461 460 ntBASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 LETM1P2-201ENST00000597330 2178 ntBASIC20.38■□□□□ 0.85
CCDC85AQ96PX6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 AL035456.1-201ENST00000456064 1369 ntBASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC85AQ96PX6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC85AQ96PX6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms