Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AL592424.1-201ENST00000563624 1536 ntBASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 PCDHA14-201ENST00000506751 2298 ntBASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 CNN2P2-201ENST00000443536 909 ntBASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 CNN2P3-201ENST00000450201 906 ntBASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 AC051619.7-201ENST00000568314 623 ntBASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 AL136317.3-201ENST00000618497 906 ntBASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.42■□□□□ 0.22
ECHDC3Q96DC8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 AC024267.1-201ENST00000582320 895 ntBASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 MIR6080-201ENST00000617359 66 ntBASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ECHDC3Q96DC8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ECHDC3Q96DC8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ECHDC3Q96DC8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ECHDC3Q96DC8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ECHDC3Q96DC8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ECHDC3Q96DC8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms