Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 MIR1233-2-201ENST00000408138 82 ntBASIC17.45■□□□□ 0.38
UBA3Q8TBC4 MIR1233-1-201ENST00000408722 82 ntBASIC17.45■□□□□ 0.38
UBA3Q8TBC4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AC079140.1-201ENST00000508039 487 ntBASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AC105339.1-204ENST00000636249 355 ntBASIC17.45■□□□□ 0.38
UBA3Q8TBC4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 AC073439.1-201ENST00000624121 1774 ntBASIC17.45■□□□□ 0.38
UBA3Q8TBC4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.45■□□□□ 0.38
UBA3Q8TBC4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBA3Q8TBC4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SPCS2P4-201ENST00000436160 681 ntBASIC17.44■□□□□ 0.38
UBA3Q8TBC4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 AC134684.3-201ENST00000641758 218 ntBASIC17.44■□□□□ 0.38
UBA3Q8TBC4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBA3Q8TBC4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 RPS8P6-201ENST00000426177 609 ntBASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AC027307.2-201ENST00000591252 911 ntBASIC17.43■□□□□ 0.38
UBA3Q8TBC4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms