Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 AC105233.2-201ENST00000523697 349 ntBASIC13.34□□□□□ -0.27
LINC00311Q8N616 AF228730.5-201ENST00000530288 346 ntBASIC13.34□□□□□ -0.27
LINC00311Q8N616 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.34□□□□□ -0.27
LINC00311Q8N616 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 AL671883.3-201ENST00000603274 991 ntBASIC13.34□□□□□ -0.27
LINC00311Q8N616 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 AL589702.1-201ENST00000641229 1509 ntBASIC13.34□□□□□ -0.27
LINC00311Q8N616 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
LINC00311Q8N616 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00311Q8N616 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
LINC00311Q8N616 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00311Q8N616 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00311Q8N616 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
LINC00311Q8N616 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
LINC00311Q8N616 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 ADH5P3-201ENST00000433842 1137 ntBASIC13.33□□□□□ -0.28
LINC00311Q8N616 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 AC008267.7-201ENST00000624570 1194 ntBASIC13.33□□□□□ -0.28
LINC00311Q8N616 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00311Q8N616 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00311Q8N616 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 YBX2P1-201ENST00000394192 760 ntBASIC13.32□□□□□ -0.28
LINC00311Q8N616 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00311Q8N616 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 AL135744.1-201ENST00000565098 629 ntBASIC13.32□□□□□ -0.28
LINC00311Q8N616 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC00311Q8N616 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms