Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AC002056.1-201ENST00000395613 760 ntBASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AP002472.1-201ENST00000577490 586 ntBASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AL078644.1-201ENST00000609881 752 ntBASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AL161645.1-201ENST00000622716 1255 ntBASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AC005622.1-201ENST00000636801 1703 ntBASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC65Q8IXS2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 AC016027.1-202ENST00000607927 1699 ntBASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC65Q8IXS2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 AC006449.6-201ENST00000612330 2296 ntBASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC65Q8IXS2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms