Protein–RNA interactions for Protein: Q8IVH2

FOXP4, Forkhead box protein P4, humanhuman

Predicted RBP Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4Q8IVH2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXP4Q8IVH2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXP4Q8IVH2 PCDHB19P-201ENST00000570871 2371 ntBASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 AC093724.1-201ENST00000448659 1027 ntBASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 RNA5SP410-201ENST00000516285 106 ntBASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 AC092171.3-201ENST00000610122 2651 ntBASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXP4Q8IVH2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AC078925.2-201ENST00000624013 1973 ntBASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AC105021.1-202ENST00000570572 669 ntBASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AF228730.6-201ENST00000641497 218 ntBASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AC084121.3-201ENST00000641716 218 ntBASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AC105233.6-201ENST00000642093 218 ntBASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 AC090340.1-201ENST00000620778 4980 ntBASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
FOXP4Q8IVH2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 CETN4P-206ENST00000642099 2168 ntBASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 AC022144.1-201ENST00000602255 1580 ntBASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXP4Q8IVH2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms