Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 CU634019.7-201ENST00000624153 1185 ntBASIC20.54■□□□□ 0.88
SMIM5Q71RC9 FP236241.2-201ENST00000624906 1185 ntBASIC20.54■□□□□ 0.88
SMIM5Q71RC9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM5Q71RC9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 MSTO2P-201ENST00000314835 1709 ntBASIC20.53■□□□□ 0.88
SMIM5Q71RC9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 GOLGA2P4-201ENST00000441462 777 ntBASIC20.53■□□□□ 0.88
SMIM5Q71RC9 AL355994.2-201ENST00000447882 704 ntBASIC20.53■□□□□ 0.88
SMIM5Q71RC9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 KRT8P22-201ENST00000562317 1415 ntBASIC20.53■□□□□ 0.88
SMIM5Q71RC9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM5Q71RC9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AL158212.4-201ENST00000624062 1286 ntBASIC20.52■□□□□ 0.88
SMIM5Q71RC9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM5Q71RC9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.52■□□□□ 0.87
SMIM5Q71RC9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMIM5Q71RC9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SMIM5Q71RC9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMIM5Q71RC9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMIM5Q71RC9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM5Q71RC9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms