Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 KRT18P48-201ENST00000434763 852 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 AC009947.2-201ENST00000444014 672 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.1□□□□□ -0.31
IFNA1P01562 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 ECEL1P2-202ENST00000465689 757 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 AC142086.2-201ENST00000569753 217 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
IFNA1P01562 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.1□□□□□ -0.31
IFNA1P01562 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 CICP13-201ENST00000422015 2789 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 TMBIM7P-203ENST00000641617 1718 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
IFNA1P01562 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
IFNA1P01562 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.09□□□□□ -0.31
IFNA1P01562 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
IFNA1P01562 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.09□□□□□ -0.31
IFNA1P01562 STK25P1-201ENST00000585406 838 ntBASIC13.09□□□□□ -0.31
IFNA1P01562 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.09□□□□□ -0.31
IFNA1P01562 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 AC010653.2-201ENST00000623505 997 ntBASIC13.09□□□□□ -0.31
IFNA1P01562 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IFNA1P01562 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.09□□□□□ -0.31
IFNA1P01562 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.09□□□□□ -0.31
IFNA1P01562 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms