Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL5O76039 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL5O76039 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDKL5O76039 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.18■□□□□ 0.66
CDKL5O76039 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL5O76039 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL5O76039 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CDKL5O76039 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 AC002056.1-201ENST00000395613 760 ntBASIC19.18■□□□□ 0.66
CDKL5O76039 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDKL5O76039 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.18■□□□□ 0.66
CDKL5O76039 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 AL513190.1-201ENST00000621254 727 ntBASIC19.18■□□□□ 0.66
CDKL5O76039 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CDKL5O76039 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL5O76039 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDKL5O76039 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL5O76039 REXO1L8P-201ENST00000604378 1897 ntBASIC19.18■□□□□ 0.66
CDKL5O76039 U82695.1-201ENST00000635752 1889 ntBASIC19.18■□□□□ 0.66
CDKL5O76039 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL5O76039 TNRC18P3-201ENST00000441896 2691 ntBASIC19.18■□□□□ 0.66
CDKL5O76039 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL5O76039 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL5O76039 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDKL5O76039 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.17■□□□□ 0.66
CDKL5O76039 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CDKL5O76039 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 AC112191.1-201ENST00000523689 701 ntBASIC19.17■□□□□ 0.66
CDKL5O76039 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDKL5O76039 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL5O76039 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 AL596087.1-201ENST00000400979 1969 ntBASIC19.17■□□□□ 0.66
CDKL5O76039 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL5O76039 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL5O76039 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CDKL5O76039 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.16■□□□□ 0.66
CDKL5O76039 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDKL5O76039 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 AC092919.2-201ENST00000623631 1645 ntBASIC19.16■□□□□ 0.66
CDKL5O76039 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDKL5O76039 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL5O76039 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL5O76039 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.16■□□□□ 0.66
CDKL5O76039 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDKL5O76039 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDKL5O76039 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 AC016027.1-202ENST00000607927 1699 ntBASIC19.16■□□□□ 0.66
CDKL5O76039 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDKL5O76039 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
CDKL5O76039 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms