Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 ABCD1P5-201ENST00000445663 754 ntBASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AC015908.1-201ENST00000478739 476 ntBASIC19.56■□□□□ 0.72
RNF216Q9NWF9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 MND1-206ENST00000622785 830 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 BRD7P6-201ENST00000431406 1860 ntBASIC19.56■□□□□ 0.72
RNF216Q9NWF9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 ZNF259P1-201ENST00000407656 1365 ntBASIC19.56■□□□□ 0.72
RNF216Q9NWF9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF216Q9NWF9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 MIR574-201ENST00000385209 96 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 AC010153.1-201ENST00000432862 727 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ELOCP30-201ENST00000447108 299 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 AC018463.1-201ENST00000456674 917 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 AC107401.1-201ENST00000503426 685 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 BNIP3P19-201ENST00000605397 577 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 RNU4-5P-201ENST00000607255 135 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 MIR3974-201ENST00000637126 96 ntBASIC19.55■□□□□ 0.72
RNF216Q9NWF9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF216Q9NWF9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AP005117.1-201ENST00000584346 1413 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 HNRNPA3P12-201ENST00000437410 1063 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AC009237.1-201ENST00000442127 744 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 ELOCP13-201ENST00000443934 329 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms