Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 HCG4-201ENST00000418983 998 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AP006288.1-201ENST00000446065 395 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AC004967.1-201ENST00000453589 447 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 HLA-J-202ENST00000469281 1241 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 MIR4469-201ENST00000583919 79 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AL691403.2-201ENST00000618460 490 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AC091812.2-201ENST00000619081 385 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AC134684.3-201ENST00000641758 218 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 ELL2P1-201ENST00000413990 1906 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 SLC22A20-204ENST00000530038 1673 ntBASIC15.32■□□□□ 0.04
UBQLN3Q9H347 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.32■□□□□ 0.04
UBQLN3Q9H347 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 HMGA1P7-201ENST00000406908 502 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 AC211486.1-202ENST00000416371 468 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 FAM58CP-201ENST00000435741 640 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 AC140658.5-201ENST00000438532 169 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 ACTG1P14-201ENST00000446382 1122 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 AC211476.1-201ENST00000503899 468 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 ME2P1-201ENST00000426028 1970 ntBASIC15.31■□□□□ 0.04
UBQLN3Q9H347 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN3Q9H347 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN3Q9H347 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms