Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
USP9XQ93008 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 AC016694.1-201ENST00000434179 700 ntBASIC14.17□□□□□ -0.14
USP9XQ93008 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 AC005077.2-201ENST00000449786 690 ntBASIC14.17□□□□□ -0.14
USP9XQ93008 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 HIST2H2BC-201ENST00000498492 580 ntBASIC14.17□□□□□ -0.14
USP9XQ93008 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.17□□□□□ -0.14
USP9XQ93008 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.17□□□□□ -0.14
USP9XQ93008 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.17□□□□□ -0.14
USP9XQ93008 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
USP9XQ93008 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
USP9XQ93008 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
USP9XQ93008 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
USP9XQ93008 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.16□□□□□ -0.14
USP9XQ93008 MIR33B-201ENST00000385104 96 ntBASIC14.16□□□□□ -0.14
USP9XQ93008 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.16□□□□□ -0.14
USP9XQ93008 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.16□□□□□ -0.14
USP9XQ93008 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.16□□□□□ -0.14
USP9XQ93008 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.16□□□□□ -0.14
USP9XQ93008 AC104982.3-201ENST00000581995 514 ntBASIC14.16□□□□□ -0.14
USP9XQ93008 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.16□□□□□ -0.14
USP9XQ93008 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
USP9XQ93008 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
USP9XQ93008 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.16□□□□□ -0.14
USP9XQ93008 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.16□□□□□ -0.14
USP9XQ93008 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.16□□□□□ -0.14
USP9XQ93008 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
USP9XQ93008 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
USP9XQ93008 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
USP9XQ93008 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
USP9XQ93008 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.15□□□□□ -0.14
USP9XQ93008 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.15□□□□□ -0.14
USP9XQ93008 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
USP9XQ93008 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
USP9XQ93008 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
USP9XQ93008 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.15□□□□□ -0.14
USP9XQ93008 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.15□□□□□ -0.14
USP9XQ93008 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.15□□□□□ -0.14
USP9XQ93008 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
USP9XQ93008 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 AL158212.4-201ENST00000624062 1286 ntBASIC14.15□□□□□ -0.14
USP9XQ93008 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.15□□□□□ -0.14
USP9XQ93008 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.15□□□□□ -0.14
USP9XQ93008 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.15□□□□□ -0.14
USP9XQ93008 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
USP9XQ93008 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms