Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 AL139010.1-201ENST00000454878 894 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC9.99□□□□□ -0.81
HSPG2P98160 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 MNT-208ENST00000575394 606 ntTSL 4 BASIC9.99□□□□□ -0.81
HSPG2P98160 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 ACTG1P2-201ENST00000415776 1125 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 ACTG1P11-201ENST00000425411 1125 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 C2orf27AP3-201ENST00000434123 579 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 AC104596.2-201ENST00000512793 793 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 ACR-203ENST00000529621 708 ntTSL 5 BASIC9.99□□□□□ -0.81
HSPG2P98160 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC9.99□□□□□ -0.81
HSPG2P98160 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC9.99□□□□□ -0.81
HSPG2P98160 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC9.99□□□□□ -0.81
HSPG2P98160 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
HSPG2P98160 AL354718.3-201ENST00000616414 581 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 CR382287.1-201ENST00000623954 586 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 AC092053.1-201ENST00000605787 1936 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC9.99□□□□□ -0.81
HSPG2P98160 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC9.99□□□□□ -0.81
HSPG2P98160 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 MIR3147-201ENST00000577811 66 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 AC011491.1-203ENST00000637688 543 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
HSPG2P98160 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC9.99□□□□□ -0.81
HSPG2P98160 CYP4F24P-201ENST00000586049 1580 ntBASIC9.99□□□□□ -0.81
HSPG2P98160 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.99□□□□□ -0.81
HSPG2P98160 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 AHRR-211ENST00000515206 462 ntTSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC9.98□□□□□ -0.81
HSPG2P98160 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC9.98□□□□□ -0.81
HSPG2P98160 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC9.98□□□□□ -0.81
HSPG2P98160 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 AC120045.2-201ENST00000567334 178 ntBASIC9.98□□□□□ -0.81
HSPG2P98160 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
HSPG2P98160 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC9.98□□□□□ -0.81
HSPG2P98160 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC9.98□□□□□ -0.81
HSPG2P98160 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HSPG2P98160 MIR1227-201ENST00000408484 88 ntBASIC9.98□□□□□ -0.81
HSPG2P98160 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms