Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 AC005829.1-201ENST00000570002 483 ntBASIC18.17■□□□□ 0.5
GAP43P17677 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
GAP43P17677 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
GAP43P17677 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GAP43P17677 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GAP43P17677 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GAP43P17677 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
GAP43P17677 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.16■□□□□ 0.5
GAP43P17677 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 BX842568.4-201ENST00000421222 227 ntBASIC18.16■□□□□ 0.5
GAP43P17677 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.16■□□□□ 0.5
GAP43P17677 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.16■□□□□ 0.5
GAP43P17677 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
GAP43P17677 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 AC026120.1-201ENST00000611536 926 ntBASIC18.16■□□□□ 0.5
GAP43P17677 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GAP43P17677 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GAP43P17677 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.16■□□□□ 0.5
GAP43P17677 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.15■□□□□ 0.5
GAP43P17677 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.15■□□□□ 0.5
GAP43P17677 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.15■□□□□ 0.5
GAP43P17677 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
GAP43P17677 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.15■□□□□ 0.5
GAP43P17677 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
GAP43P17677 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GAP43P17677 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.15■□□□□ 0.5
GAP43P17677 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.15■□□□□ 0.5
GAP43P17677 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.15■□□□□ 0.5
GAP43P17677 SPDYE11-202ENST00000450699 704 ntBASIC18.15■□□□□ 0.5
GAP43P17677 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GAP43P17677 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms