Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.79■□□□□ 0.28
VCANP13611 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCANP13611 SPTLC1P5-201ENST00000450718 252 ntBASIC16.79■□□□□ 0.28
VCANP13611 AF254983.2-201ENST00000612331 135 ntBASIC16.79■□□□□ 0.28
VCANP13611 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCANP13611 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.79■□□□□ 0.28
VCANP13611 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.79■□□□□ 0.28
VCANP13611 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VCANP13611 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.79■□□□□ 0.28
VCANP13611 LYSMD4-203ENST00000378904 2122 ntBASIC16.79■□□□□ 0.28
VCANP13611 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCANP13611 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.79■□□□□ 0.28
VCANP13611 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VCANP13611 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VCANP13611 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.78■□□□□ 0.28
VCANP13611 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.78■□□□□ 0.28
VCANP13611 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.78■□□□□ 0.28
VCANP13611 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VCANP13611 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.78■□□□□ 0.28
VCANP13611 AL096828.3-201ENST00000615354 462 ntBASIC16.78■□□□□ 0.28
VCANP13611 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VCANP13611 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.78■□□□□ 0.28
VCANP13611 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCANP13611 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.77■□□□□ 0.28
VCANP13611 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 AC135983.4-201ENST00000564116 1262 ntBASIC16.77■□□□□ 0.28
VCANP13611 AC036164.1-201ENST00000570544 333 ntBASIC16.77■□□□□ 0.28
VCANP13611 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VCANP13611 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.77■□□□□ 0.28
VCANP13611 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 SPDYE17-201ENST00000412399 783 ntBASIC16.77■□□□□ 0.28
VCANP13611 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.77■□□□□ 0.28
VCANP13611 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.77■□□□□ 0.28
VCANP13611 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.77■□□□□ 0.28
VCANP13611 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.77■□□□□ 0.28
VCANP13611 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VCANP13611 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VCANP13611 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCANP13611 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.77■□□□□ 0.28
VCANP13611 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCANP13611 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
VCANP13611 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.77■□□□□ 0.27
VCANP13611 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VCANP13611 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.27
VCANP13611 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCANP13611 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.77■□□□□ 0.27
VCANP13611 MTX1P1-201ENST00000440904 838 ntBASIC16.77■□□□□ 0.27
VCANP13611 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
VCANP13611 AC098859.1-201ENST00000502915 1238 ntBASIC16.77■□□□□ 0.27
VCANP13611 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.77■□□□□ 0.27
VCANP13611 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCANP13611 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.77■□□□□ 0.27
VCANP13611 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.77■□□□□ 0.27
VCANP13611 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
VCANP13611 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.76■□□□□ 0.27
VCANP13611 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VCANP13611 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCANP13611 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCANP13611 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.76■□□□□ 0.27
VCANP13611 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VCANP13611 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCANP13611 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VCANP13611 AZGP1P1-201ENST00000411909 902 ntBASIC16.76■□□□□ 0.27
VCANP13611 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
VCANP13611 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VCANP13611 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.76■□□□□ 0.27
VCANP13611 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.76■□□□□ 0.27
VCANP13611 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
VCANP13611 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCANP13611 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.76■□□□□ 0.27
VCANP13611 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCANP13611 AHCYP2-201ENST00000430630 1300 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms