Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 SSR4P1-203ENST00000599569 2260 ntBASIC16.81■□□□□ 0.28
RIPK2O43353 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.8■□□□□ 0.28
RIPK2O43353 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 LINC00265-3P-201ENST00000447588 903 ntBASIC16.8■□□□□ 0.28
RIPK2O43353 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.8■□□□□ 0.28
RIPK2O43353 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 AC074051.2-201ENST00000565115 352 ntBASIC16.8■□□□□ 0.28
RIPK2O43353 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.8■□□□□ 0.28
RIPK2O43353 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 AL139424.1-201ENST00000607572 797 ntBASIC16.8■□□□□ 0.28
RIPK2O43353 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 PGM5P2-202ENST00000637225 1043 ntBASIC16.8■□□□□ 0.28
RIPK2O43353 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIPK2O43353 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.8■□□□□ 0.28
RIPK2O43353 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 AL031133.1-201ENST00000406807 723 ntBASIC16.79■□□□□ 0.28
RIPK2O43353 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.79■□□□□ 0.28
RIPK2O43353 MIR5100-201ENST00000579544 119 ntBASIC16.79■□□□□ 0.28
RIPK2O43353 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 AC092329.2-201ENST00000598402 547 ntBASIC16.79■□□□□ 0.28
RIPK2O43353 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 AL592424.1-201ENST00000563624 1536 ntBASIC16.79■□□□□ 0.28
RIPK2O43353 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.79■□□□□ 0.28
RIPK2O43353 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.79■□□□□ 0.28
RIPK2O43353 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPK2O43353 AP005117.1-201ENST00000584346 1413 ntBASIC16.79■□□□□ 0.28
RIPK2O43353 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RIPK2O43353 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPK2O43353 AC092919.2-201ENST00000623631 1645 ntBASIC16.78■□□□□ 0.28
RIPK2O43353 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPK2O43353 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RIPK2O43353 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms