Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC27.72■■■□□ 2.03
CUX2O14529 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC27.72■■■□□ 2.03
CUX2O14529 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CUX2O14529 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
CUX2O14529 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC27.71■■■□□ 2.03
CUX2O14529 MIR1227-201ENST00000408484 88 ntBASIC27.71■■■□□ 2.03
CUX2O14529 AHRR-211ENST00000515206 462 ntTSL 5 BASIC27.71■■■□□ 2.03
CUX2O14529 AC104982.3-201ENST00000581995 514 ntBASIC27.71■■■□□ 2.03
CUX2O14529 AC024267.1-201ENST00000582320 895 ntBASIC27.71■■■□□ 2.03
CUX2O14529 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC27.71■■■□□ 2.03
CUX2O14529 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC27.71■■■□□ 2.03
CUX2O14529 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
CUX2O14529 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC27.71■■■□□ 2.03
CUX2O14529 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
CUX2O14529 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CUX2O14529 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC27.71■■■□□ 2.03
CUX2O14529 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CUX2O14529 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CUX2O14529 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CUX2O14529 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CUX2O14529 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC27.7■■■□□ 2.03
CUX2O14529 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CUX2O14529 CYP46A4P-201ENST00000414953 267 ntBASIC27.7■■■□□ 2.03
CUX2O14529 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CUX2O14529 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC27.7■■■□□ 2.03
CUX2O14529 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC27.7■■■□□ 2.03
CUX2O14529 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC27.7■■■□□ 2.03
CUX2O14529 NAT9-222ENST00000583476 583 ntTSL 3 BASIC27.7■■■□□ 2.03
CUX2O14529 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC27.7■■■□□ 2.03
CUX2O14529 AL451050.2-201ENST00000606967 682 ntBASIC27.7■■■□□ 2.03
CUX2O14529 AL096828.3-201ENST00000615354 462 ntBASIC27.7■■■□□ 2.03
CUX2O14529 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CUX2O14529 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CUX2O14529 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CUX2O14529 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
CUX2O14529 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC27.7■■■□□ 2.03
CUX2O14529 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CUX2O14529 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CUX2O14529 AL133466.1-201ENST00000447582 150 ntBASIC27.7■■■□□ 2.02
CUX2O14529 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC27.7■■■□□ 2.02
CUX2O14529 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CUX2O14529 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CUX2O14529 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CUX2O14529 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CUX2O14529 PXK-206ENST00000463280 2825 ntTSL 2 BASIC27.69■■■□□ 2.02
CUX2O14529 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CUX2O14529 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
CUX2O14529 UFM1-202ENST00000379649 846 ntTSL 4 BASIC27.69■■■□□ 2.02
CUX2O14529 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CUX2O14529 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC27.69■■■□□ 2.02
CUX2O14529 ACR-203ENST00000529621 708 ntTSL 5 BASIC27.69■■■□□ 2.02
CUX2O14529 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
CUX2O14529 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CUX2O14529 AL136301.1-201ENST00000615830 422 ntBASIC27.69■■■□□ 2.02
CUX2O14529 AC011491.1-203ENST00000637688 543 ntBASIC27.69■■■□□ 2.02
CUX2O14529 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC27.68■■■□□ 2.02
CUX2O14529 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CUX2O14529 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC27.68■■■□□ 2.02
CUX2O14529 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 AC134312.5-201ENST00000568031 1313 ntBASIC27.68■■■□□ 2.02
CUX2O14529 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 MIR769-201ENST00000390225 118 ntBASIC27.68■■■□□ 2.02
CUX2O14529 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 AC016700.1-201ENST00000429424 312 ntBASIC27.68■■■□□ 2.02
CUX2O14529 SUPT4H1P2-201ENST00000501248 353 ntBASIC27.68■■■□□ 2.02
CUX2O14529 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC27.68■■■□□ 2.02
CUX2O14529 MIR3147-201ENST00000577811 66 ntBASIC27.68■■■□□ 2.02
CUX2O14529 MIR4741-201ENST00000579822 90 ntBASIC27.68■■■□□ 2.02
CUX2O14529 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC27.68■■■□□ 2.02
CUX2O14529 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
CUX2O14529 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CUX2O14529 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC27.67■■■□□ 2.02
CUX2O14529 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC27.67■■■□□ 2.02
CUX2O14529 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC27.67■■■□□ 2.02
CUX2O14529 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CUX2O14529 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC27.67■■■□□ 2.02
CUX2O14529 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC27.67■■■□□ 2.02
CUX2O14529 AC007274.2-201ENST00000421675 662 ntBASIC27.67■■■□□ 2.02
CUX2O14529 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC27.67■■■□□ 2.02
CUX2O14529 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC27.67■■■□□ 2.02
CUX2O14529 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC27.67■■■□□ 2.02
CUX2O14529 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC27.67■■■□□ 2.02
CUX2O14529 HNRNPA1P48-202ENST00000565308 961 ntBASIC27.67■■■□□ 2.02
CUX2O14529 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 TPR-209ENST00000613151 2478 ntTSL 5 BASIC27.67■■■□□ 2.02
CUX2O14529 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CUX2O14529 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms