Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 TERF1P3-201ENST00000505638 1227 ntBASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 RNA5SP410-201ENST00000516285 106 ntBASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTDP1Q9Y5B0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 AC241585.1-201ENST00000433527 519 ntBASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CTDP1Q9Y5B0 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 AC236430.1-201ENST00000402231 743 ntBASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 AC098859.1-201ENST00000502915 1238 ntBASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 AC007967.4-201ENST00000614700 386 ntBASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTDP1Q9Y5B0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTDP1Q9Y5B0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms