Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 FO393414.2-201ENST00000405153 598 ntBASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 AC018665.1-201ENST00000622927 1362 ntBASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 AC233724.13-201ENST00000598383 410 ntBASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 RPSAP52-203ENST00000622976 1023 ntBASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.61■□□□□ 0.89
RTCBQ9Y3I0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 AL390961.4-201ENST00000623958 2535 ntBASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RTCBQ9Y3I0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms