Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPSAP31-201ENST00000416648 895 ntBASIC15.08■□□□□ 0
CHD8Q9HCK8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.08■□□□□ 0
CHD8Q9HCK8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CHD8Q9HCK8 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.08■□□□□ 0
CHD8Q9HCK8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CHD8Q9HCK8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CHD8Q9HCK8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.08■□□□□ 0
CHD8Q9HCK8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CHD8Q9HCK8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 AL021920.2-201ENST00000624828 1351 ntBASIC15.08■□□□□ 0
CHD8Q9HCK8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CHD8Q9HCK8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.08■□□□□ 0
CHD8Q9HCK8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.08■□□□□ 0
CHD8Q9HCK8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.08■□□□□ 0
CHD8Q9HCK8 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.08■□□□□ 0
CHD8Q9HCK8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.08■□□□□ 0
CHD8Q9HCK8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
CHD8Q9HCK8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHD8Q9HCK8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.08■□□□□ 0
CHD8Q9HCK8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.08■□□□□ 0
CHD8Q9HCK8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.07■□□□□ 0
CHD8Q9HCK8 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.07■□□□□ 0
CHD8Q9HCK8 AC022137.2-201ENST00000503482 481 ntBASIC15.07■□□□□ 0
CHD8Q9HCK8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.07■□□□□ 0
CHD8Q9HCK8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 AF254983.2-201ENST00000612331 135 ntBASIC15.07■□□□□ 0
CHD8Q9HCK8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.07■□□□□ 0
CHD8Q9HCK8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.07■□□□□ 0
CHD8Q9HCK8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.07■□□□□ 0
CHD8Q9HCK8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHD8Q9HCK8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.07■□□□□ 0
CHD8Q9HCK8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHD8Q9HCK8 PGAM1P5-201ENST00000548011 764 ntBASIC15.07■□□□□ 0
CHD8Q9HCK8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.07■□□□□ 0
CHD8Q9HCK8 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.07■□□□□ 0
CHD8Q9HCK8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CHD8Q9HCK8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.07■□□□□ 0
CHD8Q9HCK8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.06■□□□□ 0
CHD8Q9HCK8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHD8Q9HCK8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CHD8Q9HCK8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.06■□□□□ 0
CHD8Q9HCK8 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC15.06■□□□□ 0
CHD8Q9HCK8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.06■□□□□ 0
CHD8Q9HCK8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 AL589702.1-201ENST00000641229 1509 ntBASIC15.06■□□□□ 0
CHD8Q9HCK8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHD8Q9HCK8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.06■□□□□ 0
CHD8Q9HCK8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.06■□□□□ 0
CHD8Q9HCK8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHD8Q9HCK8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms