Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 CROCCP2-202ENST00000412962 2773 ntBASIC18.68■□□□□ 0.58
PTPN18Q99952 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTPN18Q99952 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN18Q99952 AL162726.2-201ENST00000438986 1017 ntBASIC18.68■□□□□ 0.58
PTPN18Q99952 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN18Q99952 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN18Q99952 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN18Q99952 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PTPN18Q99952 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PTPN18Q99952 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN18Q99952 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 AL158212.4-201ENST00000624062 1286 ntBASIC18.68■□□□□ 0.58
PTPN18Q99952 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PTPN18Q99952 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN18Q99952 AL391256.1-201ENST00000443260 1855 ntBASIC18.68■□□□□ 0.58
PTPN18Q99952 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTPN18Q99952 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PTPN18Q99952 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN18Q99952 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PTPN18Q99952 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.67■□□□□ 0.58
PTPN18Q99952 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN18Q99952 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN18Q99952 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 FAM21FP-201ENST00000426241 1131 ntBASIC18.67■□□□□ 0.58
PTPN18Q99952 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTPN18Q99952 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPN18Q99952 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPN18Q99952 AL359711.2-201ENST00000563105 872 ntBASIC18.67■□□□□ 0.58
PTPN18Q99952 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.67■□□□□ 0.58
PTPN18Q99952 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.67■□□□□ 0.58
PTPN18Q99952 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 AL031731.1-201ENST00000642131 2094 ntBASIC18.67■□□□□ 0.58
PTPN18Q99952 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PTPN18Q99952 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN18Q99952 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN18Q99952 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN18Q99952 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN18Q99952 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN18Q99952 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN18Q99952 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 AP001889.1-201ENST00000525414 633 ntBASIC18.66■□□□□ 0.58
PTPN18Q99952 AP000812.2-201ENST00000538934 718 ntBASIC18.66■□□□□ 0.58
PTPN18Q99952 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN18Q99952 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN18Q99952 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN18Q99952 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN18Q99952 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN18Q99952 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms